A RESOURCE OF THE NCI CANCER RESEARCH DATA COMMONS
ISB-CGC
Cancer Gateway in the Cloud
Access, Explore and Analyze Large-Scale Cancer Data Through the Google Cloud
Data Browsers
BigQuery Table Search
Browse BigQuery tables of metadata and molecular cancer data from the Genomic Data
Commons and other sources. Jump directly to a table to perform discovery and computation
via SQL.
Cancer Data File Browser
Explore a comprehensive selection of cancer related data files in Google Cloud Storage
Buckets, such as raw sequencing, cancer nucleotide variation, pathology or radiology
images.
Chromosomal Aberrations & Gene Fusions DB
Browse the Mitelman Database of Chromosome Aberrations and Gene Fusions in Cancer which
relates cytogenetic changes, in particular gene fusions, to tumor characteristics.
Resources
Cohort Builder / Data Explorer
A web interface to build cohorts based on clinical demographics and molecular filters.
Compare patient cohorts with various exploration tools including IGV viewer, image
viewers, and analytical visualization.
Pipelines and APIs
Learn more about how to access and analyze cancer data through programmatic interfaces
including Google Cloud virtual machines and APIs.
Notebooks
A collection of notebooks written in R and Python, to serve as both tutorials or
analysis tools for a range of users; includes reproductions of Regulome Explorer
functionality.
Controlled Access Data
Sign in to access controlled-access data on the Google Cloud. Authenticated users with
proper dbGaP authorization only.
ISB-CGC is a component of the NCI
Cancer Research Data Commons and has been funded in whole or in part with Federal funds
from the National Cancer Institute, National Institutes of Health, Department of Health and
Human Services, under Contract No. HHSN261201400008C and ID/IQ Agreement No. 17X146 under
Contract No. HHSN261201500003I.